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PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [ Equus caballus (horse) ]

Gene ID: 100072985, updated on 17-Aug-2024

Summary

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Official Symbol
PAPSS1provided by VGNC
Official Full Name
3'-phosphoadenosine 5'-phosphosulfate synthase 1provided by VGNC
Primary source
VGNC:VGNC:21153
See related
Ensembl:ENSECAG00000021678
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PAPSS1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (118108764..118197625)

Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111772597 Neighboring gene sphingomyelin synthase 2 Neighboring gene uncharacterized LOC106782861 Neighboring gene ribosomal protein L18 Neighboring gene uncharacterized LOC111770398 Neighboring gene uncharacterized LOC111770399

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009145.3 Chromosome 2 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables adenylylsulfate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfate adenylyltransferase (ATP) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfate assimilation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009145.3 Reference EquCab3.0 Primary Assembly

    Range
    118108764..118197625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023636765.1 → XP_023492533.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X1

    UniProtKB/TrEMBL
    F6YB45
    Related
    ENSECAP00000025703.3, ENSECAT00000043590.3
    Conserved Domains (2) summary
    cd00517
    Location:254 → 617
    ATPS; ATP-sulfurylase
    pfam01583
    Location:51 → 205
    APS_kinase; Adenylylsulphate kinase

  2. XM_005607903.3 → XP_005607960.1  bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 isoform X2

    See identical proteins and their annotated locations for XP_005607960.1

    UniProtKB/TrEMBL
    F6YB45
    Related
    ENSECAP00000019469.3, ENSECAT00000023500.4
    Conserved Domains (3) summary
    cd00517
    Location:233 → 596
    ATPS; ATP-sulfurylase
    TIGR00339
    Location:212 → 595
    sopT; ATP sulphurylase
    pfam01583
    Location:30 → 184
    APS_kinase; Adenylylsulphate kinase
Nucleotide Protein
Heading Accession and Version

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