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FNIP1 folliculin interacting protein 1 [ Equus caballus (horse) ]

Gene ID: 100072917, updated on 17-Aug-2024

Summary

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Official Symbol
FNIP1provided by VGNC
Official Full Name
folliculin interacting protein 1provided by VGNC
Primary source
VGNC:VGNC:18092
See related
Ensembl:ENSECAG00000017148
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See FNIP1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 14 NC_009157.3 (42990942..43120400)

Chromosome 14 - NC_009157.3Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase long chain family member 6 Neighboring gene meiotic kinetochore factor Neighboring gene Rap guanine nucleotide exchange factor 6 Neighboring gene uncharacterized LOC102148406 Neighboring gene CDC42 small effector 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009157.3 Chromosome 14 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein-folding chaperone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
folliculin-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009157.3 Reference EquCab3.0 Primary Assembly

    Range
    42990942..43120400
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023617744.1 → XP_023473512.1  folliculin-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9L0RCZ9, A0A9L0T4E0
    Related
    ENSECAP00000060714.1, ENSECAT00000092128.1
    Conserved Domains (3) summary
    pfam14636
    Location:41 → 155
    FNIP_N; Folliculin-interacting protein N-terminus
    pfam14637
    Location:316 → 548
    FNIP_M; Folliculin-interacting protein middle domain
    pfam14638
    Location:976 → 1162
    FNIP_C; Folliculin-interacting protein C-terminus

  2. XM_023617745.1 → XP_023473513.1  folliculin-interacting protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2HIN8, A0A9L0T4E0
    Related
    ENSECAP00000034403.2, ENSECAT00000047776.2
    Conserved Domains (3) summary
    pfam14636
    Location:41 → 155
    FNIP_N; Folliculin-interacting protein N-terminus
    pfam14637
    Location:288 → 520
    FNIP_M; Folliculin-interacting protein middle domain
    pfam14638
    Location:948 → 1134
    FNIP_C; Folliculin-interacting protein C-terminus

  3. XM_023617746.1 → XP_023473514.1  folliculin-interacting protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2HQN5, A0A3Q2LDS2
    Related
    ENSECAP00000035537.2, ENSECAT00000040463.2
    Conserved Domains (3) summary
    pfam14636
    Location:1 → 52
    FNIP_N; Folliculin-interacting protein N-terminus
    pfam14637
    Location:213 → 445
    FNIP_M; Folliculin-interacting protein middle domain
    pfam14638
    Location:873 → 1059
    FNIP_C; Folliculin-interacting protein C-terminus
Nucleotide Protein
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