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PLD2 phospholipase D2 [ Equus caballus (horse) ]

Gene ID: 100072863, updated on 17-Aug-2024

Summary

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Official Symbol
PLD2provided by VGNC
Official Full Name
phospholipase D2provided by VGNC
Primary source
VGNC:VGNC:21549
See related
Ensembl:ENSECAG00000014508
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PLD2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (50014914..50027806, complement)

Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene cholinergic receptor nicotinic epsilon subunit Neighboring gene chromosome 11 C17orf107 homolog Neighboring gene misshapen like kinase 1 Neighboring gene proteasome 20S subunit beta 6 Neighboring gene glycolipid transfer protein domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009154.3 Chromosome 11 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase D activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase D2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009154.3 Reference EquCab3.0 Primary Assembly

    Range
    50014914..50027806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023653367.1 → XP_023509135.1  phospholipase D2 isoform X1

    UniProtKB/TrEMBL
    F7DM52
    Conserved Domains (1) summary
    cl26365
    Location:66 → 929
    PLN03008; Phospholipase D delta

  2. XM_023653370.1 → XP_023509138.1  phospholipase D2 isoform X2

    UniProtKB/TrEMBL
    F7DM52
    Related
    ENSECAP00000012893.3, ENSECAT00000015989.3
    Conserved Domains (1) summary
    cl26365
    Location:66 → 918
    PLN03008; Phospholipase D delta

  3. XM_023653365.1 → XP_023509133.1  phospholipase D2 isoform X1

    UniProtKB/TrEMBL
    F7DM52
    Conserved Domains (1) summary
    cl26365
    Location:66 → 929
    PLN03008; Phospholipase D delta

  4. XM_023653369.1 → XP_023509137.1  phospholipase D2 isoform X1

    UniProtKB/TrEMBL
    F7DM52
    Conserved Domains (1) summary
    cl26365
    Location:66 → 929
    PLN03008; Phospholipase D delta

  5. XM_023653366.1 → XP_023509134.1  phospholipase D2 isoform X1

    UniProtKB/TrEMBL
    F7DM52
    Conserved Domains (1) summary
    cl26365
    Location:66 → 929
    PLN03008; Phospholipase D delta

  6. XM_023653372.1 → XP_023509140.1  phospholipase D2 isoform X4

    UniProtKB/TrEMBL
    A0A9L0R5L0
    Conserved Domains (1) summary
    cl26365
    Location:2 → 786
    PLN03008; Phospholipase D delta

  7. XM_023653371.1 → XP_023509139.1  phospholipase D2 isoform X3

    UniProtKB/TrEMBL
    A0A9L0R5L0
    Conserved Domains (1) summary
    cl26365
    Location:27 → 819
    PLN03008; Phospholipase D delta
Nucleotide Protein
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