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TEFM transcription elongation factor, mitochondrial [ Equus caballus (horse) ]

Gene ID: 100071813, updated on 17-Aug-2024

Summary

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Official Symbol
TEFMprovided by VGNC
Official Full Name
transcription elongation factor, mitochondrialprovided by VGNC
Primary source
VGNC:VGNC:23991
See related
Ensembl:ENSECAG00000058199
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See TEFM in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (40690782..40697072)

Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene ArfGAP with dual PH domains 2 Neighboring gene uncharacterized LOC111775697 Neighboring gene ATPase family AAA domain containing 5 Neighboring gene cytokine receptor like factor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009154.3 Chromosome 11 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA polymerase processivity factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transcription elongation by mitochondrial RNA polymerase IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription elongation factor, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009154.3 Reference EquCab3.0 Primary Assembly

    Range
    40690782..40697072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005597594.3 → XP_005597651.1  transcription elongation factor, mitochondrial

    See identical proteins and their annotated locations for XP_005597651.1

    UniProtKB/TrEMBL
    A0A9L0QXW0
    Related
    ENSECAP00000056232.1, ENSECAT00000119994.1
    Conserved Domains (1) summary
    pfam12836
    Location:77 → 119
    HHH_3; Helix-hairpin-helix motif

RNA

  1. XR_001381257.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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