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GOLGB1 golgin B1 [ Equus caballus (horse) ]

Gene ID: 100070765, updated on 17-Aug-2024

Summary

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Official Symbol
GOLGB1provided by VGNC
Official Full Name
golgin B1provided by VGNC
Primary source
VGNC:VGNC:18456
See related
Ensembl:ENSECAG00000009513
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See GOLGB1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 19 NC_009162.3 (40147862..40224924)

Chromosome 19 - NC_009162.3Genomic Context describing neighboring genes Neighboring gene ELL associated factor 2 Neighboring gene IQ motif containing B1 Neighboring gene hematopoietic cell-specific Lyn substrate 1 Neighboring gene F-box protein 40

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009162.3 Chromosome 19 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cis-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
golgin subfamily B member 1
Names
golgin B1, golgi integral membrane protein
golgin subfamily b member 1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001309269.1 → NP_001296198.1  golgin subfamily B member 1

    Status: VALIDATED

    Source sequence(s)
    AAWR02011894, JL620335
    UniProtKB/TrEMBL
    A0A3Q2HZS8
    Conserved Domains (2) summary
    COG1196
    Location:825 → 1664
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:321 → 1105
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009162.3 Reference EquCab3.0 Primary Assembly

    Range
    40147862..40224924
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023623158.1 → XP_023478926.1  golgin subfamily B member 1 isoform X5

    UniProtKB/TrEMBL
    F6WPQ1
    Conserved Domains (2) summary
    cl25732
    Location:833 → 1672
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27381
    Location:38 → 295
    Myosin_head; Myosin head (motor domain)

  2. XM_023623156.1 → XP_023478924.1  golgin subfamily B member 1 isoform X3

    UniProtKB/TrEMBL
    F6WPQ1
    Conserved Domains (2) summary
    cl25732
    Location:1892 → 2683
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27381
    Location:38 → 295
    Myosin_head; Myosin head (motor domain)

  3. XM_023623157.1 → XP_023478925.1  golgin subfamily B member 1 isoform X4

    UniProtKB/TrEMBL
    F6WPQ1
    Conserved Domains (2) summary
    cl25732
    Location:833 → 1672
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27381
    Location:38 → 295
    Myosin_head; Myosin head (motor domain)

  4. XM_023623153.1 → XP_023478921.1  golgin subfamily B member 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HZS8
    Related
    ENSECAP00000040166.2, ENSECAT00000064942.3
    Conserved Domains (2) summary
    cl25732
    Location:833 → 1672
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27381
    Location:38 → 295
    Myosin_head; Myosin head (motor domain)

  5. XM_023623155.1 → XP_023478923.1  golgin subfamily B member 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2HZS8
    Related
    ENSECAP00000007604.3, ENSECAT00000009916.4
    Conserved Domains (1) summary
    cl25732
    Location:792 → 1631
    SMC_N; RecF/RecN/SMC N terminal domain

  6. XM_023623154.1 → XP_023478922.1  golgin subfamily B member 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HZS8
    Conserved Domains (2) summary
    cl25732
    Location:833 → 1672
    SMC_N; RecF/RecN/SMC N terminal domain
    cl27381
    Location:38 → 295
    Myosin_head; Myosin head (motor domain)
Nucleotide Protein
Heading Accession and Version

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