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PI4K2A phosphatidylinositol 4-kinase type 2 alpha [ Equus caballus (horse) ]

Gene ID: 100070680, updated on 17-Aug-2024

Summary

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Official Symbol
PI4K2Aprovided by VGNC
Official Full Name
phosphatidylinositol 4-kinase type 2 alphaprovided by VGNC
Primary source
VGNC:VGNC:110530
See related
Ensembl:ENSECAG00000008327
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PI4K2A in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (31814807..31844266, complement)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene MARVEL domain containing 1 Neighboring gene arginine vasopressin induced 1 Neighboring gene MORN repeat containing 4 Neighboring gene 4-hydroxy-2-oxoglutarate aldolase 1 Neighboring gene chromosome 1 C10orf62 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009144.3 Chromosome 1 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol 4-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4-kinase type 2-alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    31814807..31844266 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001500347.4 → XP_001500397.3  phosphatidylinositol 4-kinase type 2-alpha

    UniProtKB/TrEMBL
    A0A9L0TCR9
    Related
    ENSECAP00000084897.1, ENSECAT00000088923.1
    Conserved Domains (1) summary
    pfam00454
    Location:130 → 428
    PI3_PI4_kinase; Phosphatidylinositol 3- and 4-kinase
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials