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SLC35A1 solute carrier family 35 member A1 [ Equus caballus (horse) ]

Gene ID: 100070654, updated on 17-Aug-2024

Summary

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Official Symbol
SLC35A1provided by VGNC
Official Full Name
solute carrier family 35 member A1provided by VGNC
Primary source
VGNC:VGNC:23161
See related
Ensembl:ENSECAG00000007207
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See SLC35A1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (41236183..41264834)

Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene chromosome 10 C6orf163 homolog Neighboring gene cilia and flagella associated protein 206 Neighboring gene arginyl-tRNA synthetase 2, mitochondrial Neighboring gene origin recognition complex subunit 3 Neighboring gene akirin 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyrimidine nucleotide-sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pyrimidine nucleotide-sugar transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-sialic acid transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009153.3 Reference EquCab3.0 Primary Assembly

    Range
    41236183..41264834
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023650788.1 → XP_023506556.1  CMP-sialic acid transporter

    UniProtKB/TrEMBL
    A0A5F5PEP1, F7CRX2
    Related
    ENSECAP00000005501.2, ENSECAT00000007519.4
    Conserved Domains (1) summary
    pfam04142
    Location:8 → 314
    Nuc_sug_transp; Nucleotide-sugar transporter
Nucleotide Protein
Heading Accession and Version

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Research Materials