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ANKFN1 ankyrin repeat and fibronectin type III domain containing 1 [ Equus caballus (horse) ]

Gene ID: 100070645, updated on 17-Aug-2024

Summary

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Official Symbol
ANKFN1provided by VGNC
Official Full Name
ankyrin repeat and fibronectin type III domain containing 1provided by VGNC
Primary source
VGNC:VGNC:15311
See related
Ensembl:ENSECAG00000019701
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ANKFN1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (31003481..31259279)

Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene phosphatidylcholine transfer protein Neighboring gene uncharacterized LOC111775772 Neighboring gene uncharacterized LOC106782731 Neighboring gene noggin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009154.3 Chromosome 11 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in establishment of mitotic spindle orientation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of establishment of bipolar cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and fibronectin type-III domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009154.3 Reference EquCab3.0 Primary Assembly

    Range
    31003481..31259279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023652825.1 → XP_023508593.1  ankyrin repeat and fibronectin type-III domain-containing protein 1

    UniProtKB/TrEMBL
    A0A9L0QZ95
    Related
    ENSECAP00000055768.1, ENSECAT00000124915.1
    Conserved Domains (3) summary
    cd00063
    Location:359 → 452
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd00204
    Location:220 → 286
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:225 → 259
    ANK; ANK repeat [structural motif]
Nucleotide Protein
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