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ACSM3 acyl-CoA synthetase medium chain family member 3 [ Equus caballus (horse) ]

Gene ID: 100068672, updated on 17-Aug-2024

Summary

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Official Symbol
ACSM3provided by VGNC
Official Full Name
acyl-CoA synthetase medium chain family member 3provided by VGNC
Primary source
VGNC:VGNC:49262
See related
Ensembl:ENSECAG00000006669
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
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Genomic context

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See ACSM3 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 13 NC_009156.3 (26118204..26142601)

Chromosome 13 - NC_009156.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102147805 Neighboring gene THUMP domain containing 1 Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 4 Neighboring gene ERI1 exoribonuclease 2 Neighboring gene RNA exonuclease 5 Neighboring gene protein disulfide-isomerase-like protein of the testis

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009156.3 Chromosome 13 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-coenzyme A synthetase ACSM3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009156.3 Reference EquCab3.0 Primary Assembly

    Range
    26118204..26142601
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005598854.3 → XP_005598911.1  acyl-coenzyme A synthetase ACSM3, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_005598911.1

    UniProtKB/TrEMBL
    A0A9L0TSS4
    Related
    ENSECAP00000090092.1, ENSECAT00000096885.1
    Conserved Domains (2) summary
    cd05928
    Location:48 → 577
    MACS_euk; Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM)
    COG0365
    Location:45 → 576
    Acs; Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase [Lipid transport and metabolism]

  2. XM_001500617.6 → XP_001500667.1  acyl-coenzyme A synthetase ACSM3, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_001500667.1

    UniProtKB/TrEMBL
    A0A9L0TSS4
    Related
    ENSECAP00000005111.4, ENSECAT00000007072.4
    Conserved Domains (2) summary
    cd05928
    Location:48 → 577
    MACS_euk; Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM)
    COG0365
    Location:45 → 576
    Acs; Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase [Lipid transport and metabolism]

  3. XM_023616139.1 → XP_023471907.1  acyl-coenzyme A synthetase ACSM3, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A9L0TJA8, A0A9L0TSS4
    Related
    ENSECAP00000086680.1, ENSECAT00000128252.1
    Conserved Domains (1) summary
    cl17068
    Location:48 → 543
    AFD_class_I; Adenylate forming domain, Class I superfamily

  4. XM_014730064.2 → XP_014585550.1  acyl-coenzyme A synthetase ACSM3, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A9L0TSS4
    Conserved Domains (2) summary
    COG0365
    Location:45 → 508
    Acs; Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase [Lipid transport and metabolism]
    cl17068
    Location:48 → 509
    AFD_class_I; Adenylate forming domain, Class I superfamily

RNA

  1. XR_002799258.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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