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THAP4 THAP domain containing 4 [ Equus caballus (horse) ]

Gene ID: 100067775, updated on 17-Aug-2024

Summary

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Official Symbol
THAP4provided by VGNC
Official Full Name
THAP domain containing 4provided by VGNC
Primary source
VGNC:VGNC:58506
See related
Ensembl:ENSECAG00000000252
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See THAP4 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (26828146..26875153, complement)

Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 25 Neighboring gene BCL2 family apoptosis regulator BOK Neighboring gene autophagy related 4B cysteine peptidase Neighboring gene uncharacterized LOC111773882 Neighboring gene deoxythymidylate kinase Neighboring gene inhibitor of growth family member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009149.3 Chromosome 6 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
peroxynitrite isomerase THAP4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009149.3 Reference EquCab3.0 Primary Assembly

    Range
    26828146..26875153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023642799.1 → XP_023498567.1  peroxynitrite isomerase THAP4 isoform X2

    UniProtKB/TrEMBL
    A0A9L0RWN5, F7CCC0
    Related
    ENSECAP00000000160.2, ENSECAT00000000218.3
    Conserved Domains (3) summary
    cd07828
    Location:421 → 573
    nitrobindin; nitrobindin heme-binding domain
    smart00980
    Location:4 → 85
    THAP; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion
    cl28033
    Location:146 → 338
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  2. XM_023642800.1 → XP_023498568.1  peroxynitrite isomerase THAP4 isoform X3

    Conserved Domains (3) summary
    cd07828
    Location:286 → 438
    nitrobindin; nitrobindin heme-binding domain
    cl25627
    Location:217 → 263
    HrpB7; Bacterial type III secretion protein (HrpB7)
    cl28033
    Location:11 → 203
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  3. XM_023642798.1 → XP_023498566.1  peroxynitrite isomerase THAP4 isoform X1

    UniProtKB/TrEMBL
    A0A9L0RWN5, F7CCC0
    Related
    ENSECAP00000082748.1, ENSECAT00000104019.1
    Conserved Domains (3) summary
    cd07828
    Location:421 → 573
    nitrobindin; nitrobindin heme-binding domain
    smart00980
    Location:4 → 85
    THAP; The THAP domain is a putative DNA-binding domain (DBD) and probably also binds a zinc ion
    cl28033
    Location:146 → 338
    Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region

  4. XM_001497749.6 → XP_001497799.2  peroxynitrite isomerase THAP4 isoform X4

    See identical proteins and their annotated locations for XP_001497799.2

    Conserved Domains (1) summary
    cd07828
    Location:10 → 162
    nitrobindin; nitrobindin heme-binding domain
Nucleotide Protein
Heading Accession and Version

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