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RTN4RL2 reticulon 4 receptor like 2 [ Equus caballus (horse) ]

Gene ID: 100066806, updated on 15-Aug-2024

Summary

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Gene symbol
RTN4RL2
Gene description
reticulon 4 receptor like 2
See related
Ensembl:ENSECAG00000028321
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See RTN4RL2 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 12 NC_009155.3 (21090394..21106133)

Chromosome 12 - NC_009155.3Genomic Context describing neighboring genes Neighboring gene proteoglycan 3 Neighboring gene solute carrier family 43 member 3 Neighboring gene solute carrier family 43 member 1 Neighboring gene uncharacterized LOC106781461 Neighboring gene uncharacterized LOC106781462

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009155.3 Chromosome 12 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
reticulon-4 receptor-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009155.3 Reference EquCab3.0 Primary Assembly

    Range
    21090394..21106133
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023654077.1 → XP_023509845.1  reticulon-4 receptor-like 2

    UniProtKB/TrEMBL
    A0A3Q2IAW0
    Related
    ENSECAP00000045406.1, ENSECAT00000033061.3
    Conserved Domains (4) summary
    sd00033
    Location:62 → 83
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:156 → 215
    LRR_8; Leucine rich repeat
    cl15307
    Location:261 → 311
    TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
    cl26464
    Location:289 → 369
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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