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ZBTB44 zinc finger and BTB domain containing 44 [ Equus caballus (horse) ]

Gene ID: 100064712, updated on 17-Aug-2024

Summary

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Official Symbol
ZBTB44provided by VGNC
Official Full Name
zinc finger and BTB domain containing 44provided by VGNC
Primary source
VGNC:VGNC:25151
See related
Ensembl:ENSECAG00000013755
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ZBTB44 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 7 NC_009150.3 (39744861..39822989, complement)

Chromosome 7 - NC_009150.3Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor like protein 2 Neighboring gene ST14 transmembrane serine protease matriptase Neighboring gene uncharacterized LOC102150322 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009150.3 Chromosome 7 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009150.3 Reference EquCab3.0 Primary Assembly

    Range
    39744861..39822989 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023645144.1 → XP_023500912.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A9L0TFV1, F7BB21
    Conserved Domains (6) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:487 → 508
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  2. XM_023645143.1 → XP_023500911.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A9L0TFV1, F7BB21
    Conserved Domains (6) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:487 → 508
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  3. XM_023645145.1 → XP_023500913.1  zinc finger and BTB domain-containing protein 44 isoform X2

    UniProtKB/TrEMBL
    A0A9L0TAF7
    Related
    ENSECAP00000085260.1, ENSECAT00000105452.1
    Conserved Domains (4) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:21 → 128
    BTB; BTB/POZ domain
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  4. XM_023645142.1 → XP_023500910.1  zinc finger and BTB domain-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A9L0TFV1, F7BB21
    Related
    ENSECAP00000011485.2, ENSECAT00000014370.3
    Conserved Domains (6) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:487 → 508
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  5. XM_005611719.3 → XP_005611776.1  zinc finger and BTB domain-containing protein 44 isoform X1

    See identical proteins and their annotated locations for XP_005611776.1

    UniProtKB/TrEMBL
    A0A9L0TFV1, F7BB21
    Conserved Domains (6) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:487 → 508
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
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