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LGALS12 galectin 12 [ Equus caballus (horse) ]

Gene ID: 100064700, updated on 17-Aug-2024

Summary

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Official Symbol
LGALS12provided by VGNC
Official Full Name
galectin 12provided by VGNC
Primary source
VGNC:VGNC:19639
See related
Ensembl:ENSECAG00000019637
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See LGALS12 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 12 NC_009155.3 (27306514..27316679)

Chromosome 12 - NC_009155.3Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 9 Neighboring gene phospholipase A and acyltransferase 5 Neighboring gene galectin-12-like Neighboring gene retinoic acid receptor responder protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009155.3 Chromosome 12 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactoside binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lactose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of CD4-positive, alpha-beta T cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of type II interferon production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galectin-12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009155.3 Reference EquCab3.0 Primary Assembly

    Range
    27306514..27316679
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005598262.3 → XP_005598319.1  galectin-12 isoform X2

    UniProtKB/TrEMBL
    A0A9L0SZH6, F7D9H1
    Related
    ENSECAP00000081443.1, ENSECAT00000123991.1
    Conserved Domains (1) summary
    smart00908
    Location:33 → 158
    Gal-bind_lectin; Galactoside-binding lectin

  2. XM_001495526.6 → XP_001495576.3  galectin-12 isoform X1

    UniProtKB/TrEMBL
    A0A9L0SI65, F7D9H1
    Related
    ENSECAP00000074618.1, ENSECAT00000131756.1
    Conserved Domains (1) summary
    smart00908
    Location:33 → 158
    Gal-bind_lectin; Galactoside-binding lectin
Nucleotide Protein
Heading Accession and Version

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