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ACER2 alkaline ceramidase 2 [ Equus caballus (horse) ]

Gene ID: 100063894, updated on 8-Mar-2024

Summary

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Official Symbol
ACER2provided by VGNC
Official Full Name
alkaline ceramidase 2provided by VGNC
Primary source
VGNC:VGNC:14977
See related
Ensembl:ENSECAG00000017054
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ACER2 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
6
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 23 NC_009166.3 (38321956..38352445)
102 previous assembly EquCab2.0 (GCF_000002305.2) 23 NC_009166.2 (38732325..38762786)

Chromosome 23 - NC_009166.3Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S12 pseudogene Neighboring gene DENN domain containing 4C Neighboring gene ribosomal protein S6 Neighboring gene uncharacterized LOC111770115 Neighboring gene solute carrier family 24 member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009166.3 Reference EquCab3.0 Primary Assembly

    Range
    38321956..38352445
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001496449.5 → XP_001496499.1  alkaline ceramidase 2

    See identical proteins and their annotated locations for XP_001496499.1

    UniProtKB/TrEMBL
    F6XSP1
    Related
    ENSECAP00000014696.1, ENSECAT00000018040.4
    Conserved Domains (1) summary
    pfam05875
    Location:13 → 261
    Ceramidase; Ceramidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials