U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLC25A20 solute carrier family 25 member 20 [ Equus caballus (horse) ]

Gene ID: 100063527, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
SLC25A20provided by VGNC
Official Full Name
solute carrier family 25 member 20provided by VGNC
Primary source
VGNC:VGNC:112187
See related
Ensembl:ENSECAG00000019650
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SLC25A20 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 16 NC_009159.3 (39649281..39692526)

Chromosome 16 - NC_009159.3Genomic Context describing neighboring genes Neighboring gene prolyl 4-hydroxylase, transmembrane Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2 Neighboring gene 40S ribosomal protein S20 pseudogene Neighboring gene protein kinase cAMP-dependent type II regulatory subunit alpha Neighboring gene inositol hexakisphosphate kinase 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_009159.3 Chromosome 16 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009159.3 Reference EquCab3.0 Primary Assembly

    Range
    39649281..39692526
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001494717.5 → XP_001494767.2  mitochondrial carnitine/acylcarnitine carrier protein isoform X1

    UniProtKB/TrEMBL
    F7DCX4
    Related
    ENSECAP00000017462.4, ENSECAT00000021215.4
    Conserved Domains (1) summary
    pfam00153
    Location:106 → 198
    Mito_carr; Mitochondrial carrier protein

  2. XM_005600689.3 → XP_005600746.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

    UniProtKB/TrEMBL
    A0A9L0R5Y8, F7DCX4
    Related
    ENSECAP00000057052.1, ENSECAT00000113362.1
    Conserved Domains (1) summary
    pfam00153
    Location:95 → 187
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.