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ACSL6 acyl-CoA synthetase long chain family member 6 [ Equus caballus (horse) ]

Gene ID: 100063361, updated on 8-Mar-2024

Summary

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Official Symbol
ACSL6provided by VGNC
Official Full Name
acyl-CoA synthetase long chain family member 6provided by VGNC
Primary source
VGNC:VGNC:55396
See related
Ensembl:ENSECAG00000010126
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ACSL6 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
25
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 14 NC_009157.3 (42820221..42879519)
102 previous assembly EquCab2.0 (GCF_000002305.2) 14 NC_009157.2 (43516989..43576028)

Chromosome 14 - NC_009157.3Genomic Context describing neighboring genes Neighboring gene CLIP-associating protein 2-like Neighboring gene prolyl 4-hydroxylase subunit alpha 2 Neighboring gene uncharacterized LOC100146132 Neighboring gene colony stimulating factor 2 Neighboring gene meiotic kinetochore factor Neighboring gene folliculin interacting protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009157.3 Reference EquCab3.0 Primary Assembly

    Range
    42820221..42879519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023617737.1 → XP_023473505.1  long-chain-fatty-acid--CoA ligase 6 isoform X8

    UniProtKB/TrEMBL
    A0A3Q2KLQ5
    Conserved Domains (1) summary
    cd05927
    Location:116 → 705
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_023617734.1 → XP_023473502.1  long-chain-fatty-acid--CoA ligase 6 isoform X4

    UniProtKB/TrEMBL
    A0A3Q2KLQ5
    Related
    ENSECAP00000024048.1, ENSECAT00000038821.3
    Conserved Domains (1) summary
    cd05927
    Location:141 → 730
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  3. XM_023617733.1 → XP_023473501.1  long-chain-fatty-acid--CoA ligase 6 isoform X3

    UniProtKB/TrEMBL
    F6ZUV9
    Conserved Domains (1) summary
    cd05927
    Location:149 → 731
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  4. XM_023617731.1 → XP_023473499.1  long-chain-fatty-acid--CoA ligase 6 isoform X2

    UniProtKB/TrEMBL
    F6ZUV9
    Conserved Domains (1) summary
    cd05927
    Location:149 → 738
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  5. XM_023617738.1 → XP_023473506.1  long-chain-fatty-acid--CoA ligase 6 isoform X9

    UniProtKB/TrEMBL
    F6ZUV9
    Conserved Domains (1) summary
    cd05927
    Location:149 → 645
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  6. XM_023617730.1 → XP_023473498.1  long-chain-fatty-acid--CoA ligase 6 isoform X1

    UniProtKB/TrEMBL
    F6ZUV9
    Conserved Domains (1) summary
    cd05927
    Location:149 → 738
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  7. XM_023617735.1 → XP_023473503.1  long-chain-fatty-acid--CoA ligase 6 isoform X7

    UniProtKB/TrEMBL
    F6ZUV9
    Conserved Domains (1) summary
    cd05927
    Location:149 → 719
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  8. XM_023617739.1 → XP_023473507.1  long-chain-fatty-acid--CoA ligase 6 isoform X10

    UniProtKB/TrEMBL
    F6ZUV9
    Conserved Domains (1) summary
    cd05927
    Location:149 → 633
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  9. XM_005599446.3 → XP_005599503.1  long-chain-fatty-acid--CoA ligase 6 isoform X5

    See identical proteins and their annotated locations for XP_005599503.1

    UniProtKB/TrEMBL
    F6ZUV9
    Related
    ENSECAP00000009006.4, ENSECAT00000011509.4
    Conserved Domains (2) summary
    PLN02736
    Location:113 → 727
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:149 → 726
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  10. XM_005599447.3 → XP_005599504.1  long-chain-fatty-acid--CoA ligase 6 isoform X6

    See identical proteins and their annotated locations for XP_005599504.1

    UniProtKB/TrEMBL
    A0A3Q2H6X6, F6ZUV9
    Related
    ENSECAP00000029188.1, ENSECAT00000063068.3
    Conserved Domains (2) summary
    PLN02736
    Location:113 → 727
    PLN02736; long-chain acyl-CoA synthetase
    cd05927
    Location:149 → 726
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  11. XM_023617736.1 → XP_023473504.1  long-chain-fatty-acid--CoA ligase 6 isoform X8

    UniProtKB/TrEMBL
    A0A3Q2KLQ5
    Conserved Domains (1) summary
    cd05927
    Location:116 → 705
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
Nucleotide Protein
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