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SRGN serglycin [ Equus caballus (horse) ]

Gene ID: 100063248, updated on 17-Aug-2024

Summary

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Official Symbol
SRGNprovided by VGNC
Official Full Name
serglycinprovided by VGNC
Primary source
VGNC:VGNC:23583
See related
Ensembl:ENSECAG00000009192
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See SRGN in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (57784722..57799855)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene TGFB1-induced anti-apoptotic factor 1 Neighboring gene vitamin D 25-hydroxylase pseudogene Neighboring gene kinesin family binding protein Neighboring gene VPS26 retromer complex component A Neighboring gene 60S ribosomal protein L36a-like Neighboring gene Suv3 like RNA helicase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009144.3 Chromosome 1 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of bone mineralization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in secretory granule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in secretory granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serglycin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    57784722..57799855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001503648.4 → XP_001503698.1  serglycin

    UniProtKB/TrEMBL
    F6WU42
    Related
    ENSECAP00000007103.2, ENSECAT00000009345.4
    Conserved Domains (1) summary
    pfam04360
    Location:2 → 147
    Serglycin; Serglycin
Nucleotide Protein
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Gene LinkOut

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