U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BNC2 basonuclin zinc finger protein 2 [ Equus caballus (horse) ]

Gene ID: 100062869, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
BNC2provided by VGNC
Official Full Name
basonuclin zinc finger protein 2provided by VGNC
Primary source
VGNC:VGNC:15856
See related
Ensembl:ENSECAG00000017503
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See BNC2 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 23 NC_009166.3 (35724175..36148639, complement)

Chromosome 23 - NC_009166.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111770180 Neighboring gene uncharacterized LOC111770181 Neighboring gene long intergenic non-protein coding RNA 3041 Neighboring gene uncharacterized LOC111770182 Neighboring gene centlein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_009166.3 Chromosome 23 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc finger protein basonuclin-2
Names
basonuclin 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009166.3 Reference EquCab3.0 Primary Assembly

    Range
    35724175..36148639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014735486.2 → XP_014590972.1  zinc finger protein basonuclin-2 isoform X5

    UniProtKB/TrEMBL
    A0A9L0T5B8, F6SAX3
    Related
    ENSECAP00000056579.1, ENSECAT00000095740.1
    Conserved Domains (1) summary
    sd00017
    Location:928 → 949
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_023627392.1 → XP_023483160.1  zinc finger protein basonuclin-2 isoform X4

    UniProtKB/TrEMBL
    A0A9L0SH44, F6SAX3
    Related
    ENSECAP00000015117.3, ENSECAT00000018527.4
    Conserved Domains (1) summary
    sd00017
    Location:956 → 977
    ZF_C2H2; C2H2 Zn finger [structural motif]

  3. XM_023627391.1 → XP_023483159.1  zinc finger protein basonuclin-2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2HQL9
    Conserved Domains (1) summary
    sd00017
    Location:1021 → 1042
    ZF_C2H2; C2H2 Zn finger [structural motif]

  4. XM_014735485.2 → XP_014590971.1  zinc finger protein basonuclin-2 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2H272
    Related
    ENSECAP00000079588.1, ENSECAT00000119148.1
    Conserved Domains (1) summary
    sd00017
    Location:995 → 1016
    ZF_C2H2; C2H2 Zn finger [structural motif]

  5. XM_014735484.2 → XP_014590970.1  zinc finger protein basonuclin-2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HQL9
    Related
    ENSECAP00000035517.2, ENSECAT00000048723.3
    Conserved Domains (1) summary
    sd00017
    Location:1023 → 1044
    ZF_C2H2; C2H2 Zn finger [structural motif]

  6. XM_023627393.1 → XP_023483161.1  zinc finger protein basonuclin-2 isoform X6

    UniProtKB/TrEMBL
    A0A3Q2H272, A0A5F5PPG7
    Related
    ENSECAP00000050328.2, ENSECAT00000075421.2
    Conserved Domains (1) summary
    sd00017
    Location:1043 → 1064
    ZF_C2H2; C2H2 Zn finger [structural motif]

  7. XM_023627399.1 → XP_023483167.1  zinc finger protein basonuclin-2 isoform X12

    UniProtKB/TrEMBL
    A0A9L0T5B8, F6SAX3
    Related
    ENSECAP00000083476.1, ENSECAT00000121028.1
    Conserved Domains (1) summary
    sd00017
    Location:928 → 949
    ZF_C2H2; C2H2 Zn finger [structural motif]

  8. XM_023627398.1 → XP_023483166.1  zinc finger protein basonuclin-2 isoform X11

    UniProtKB/TrEMBL
    A0A9L0SH44, F6SAX3
    Related
    ENSECAP00000073517.1, ENSECAT00000091331.1
    Conserved Domains (1) summary
    sd00017
    Location:956 → 977
    ZF_C2H2; C2H2 Zn finger [structural motif]

  9. XM_023627400.1 → XP_023483168.1  zinc finger protein basonuclin-2 isoform X13

    UniProtKB/TrEMBL
    F6SAX3
    Conserved Domains (2) summary
    sd00017
    Location:863 → 884
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:661 → 682
    ZF_C2H2; C2H2 Zn finger [structural motif]

  10. XM_023627397.1 → XP_023483165.1  zinc finger protein basonuclin-2 isoform X10

    UniProtKB/TrEMBL
    A0A3Q2IIB3, A0A9L0S251
    Related
    ENSECAP00000045412.3, ENSECAT00000051194.3
    Conserved Domains (1) summary
    sd00017
    Location:401 → 422
    ZF_C2H2; C2H2 Zn finger [structural motif]

  11. XM_014735487.2 → XP_014590973.1  zinc finger protein basonuclin-2 isoform X7

    UniProtKB/TrEMBL
    A0A9L0S251
    Conserved Domains (1) summary
    sd00017
    Location:429 → 450
    ZF_C2H2; C2H2 Zn finger [structural motif]

  12. XM_014735488.2 → XP_014590974.1  zinc finger protein basonuclin-2 isoform X9

    UniProtKB/TrEMBL
    A0A9L0S251
    Conserved Domains (1) summary
    sd00017
    Location:429 → 450
    ZF_C2H2; C2H2 Zn finger [structural motif]

  13. XM_023627394.1 → XP_023483162.1  zinc finger protein basonuclin-2 isoform X8

    UniProtKB/TrEMBL
    A0A9L0S251
    Related
    ENSECAP00000068208.1, ENSECAT00000090473.1
    Conserved Domains (1) summary
    sd00017
    Location:429 → 450
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.