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LAYN layilin [ Equus caballus (horse) ]

Gene ID: 100061887, updated on 8-Mar-2024

Summary

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Official Symbol
LAYNprovided by VGNC
Official Full Name
layilinprovided by VGNC
Primary source
VGNC:VGNC:59405
See related
Ensembl:ENSECAG00000016154
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See LAYN in Genome Data Viewer
Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 7 NC_009150.3 (20626009..20652002)
102 previous assembly EquCab2.0 (GCF_000002305.2) 7 NC_009150.2 (20133268..20155799)

Chromosome 7 - NC_009150.3Genomic Context describing neighboring genes Neighboring gene microRNA mir-34b Neighboring gene HOATZ cilia and flagella associated protein Neighboring gene microRNA mir-34c Neighboring gene uncharacterized LOC102148305 Neighboring gene salt inducible kinase 2 Neighboring gene protein phosphatase 2 scaffold subunit Abeta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hyaluronic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
layilin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009150.3 Reference EquCab3.0 Primary Assembly

    Range
    20626009..20652002
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023644773.1 → XP_023500541.1  layilin isoform X1

    UniProtKB/TrEMBL
    F6VGJ3
    Conserved Domains (1) summary
    cd03595
    Location:30 → 178
    CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

  2. XM_014741359.2 → XP_014596845.1  layilin isoform X2

    UniProtKB/TrEMBL
    F6VGJ3
    Related
    ENSECAP00000013706.3, ENSECAT00000016933.4
    Conserved Domains (1) summary
    cd03595
    Location:30 → 178
    CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

  3. XM_023644775.1 → XP_023500543.1  layilin isoform X4

    UniProtKB/TrEMBL
    A0A9L0SRM9
    Conserved Domains (1) summary
    cl02432
    Location:1 → 34
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  4. XM_023644779.1 → XP_023500547.1  layilin isoform X5

    UniProtKB/TrEMBL
    A0A9L0SRM9
    Conserved Domains (1) summary
    cl02432
    Location:1 → 34
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  5. XM_023644774.1 → XP_023500542.1  layilin isoform X3

    Conserved Domains (1) summary
    cl02432
    Location:13 → 62
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  6. XM_023644776.1 → XP_023500544.1  layilin isoform X4

    UniProtKB/TrEMBL
    A0A9L0SRM9
    Conserved Domains (1) summary
    cl02432
    Location:1 → 34
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

  7. XM_023644777.1 → XP_023500545.1  layilin isoform X4

    UniProtKB/TrEMBL
    A0A9L0SRM9
    Conserved Domains (1) summary
    cl02432
    Location:1 → 34
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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