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ACSS3 acyl-CoA synthetase short chain family member 3 [ Equus caballus (horse) ]

Gene ID: 100061000, updated on 17-Aug-2024

Summary

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Official Symbol
ACSS3provided by VGNC
Official Full Name
acyl-CoA synthetase short chain family member 3provided by VGNC
Primary source
VGNC:VGNC:15011
See related
Ensembl:ENSECAG00000008242
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ACSS3 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 28 NC_009171.3 (9399860..9568246)

Chromosome 28 - NC_009171.3Genomic Context describing neighboring genes Neighboring gene myogenic factor 5 Neighboring gene uncharacterized LOC111771097 Neighboring gene lin-7 homolog A, crumbs cell polarity complex component Neighboring gene V-type proton ATPase subunit G 1 pseudogene Neighboring gene PTPRF interacting protein alpha 2 Neighboring gene coiled-coil domain containing 59

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009171.3 Chromosome 28 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables propionate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-CoA synthetase short-chain family member 3, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009171.3 Reference EquCab3.0 Primary Assembly

    Range
    9399860..9568246
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001915509.5 → XP_001915544.2  acyl-CoA synthetase short-chain family member 3, mitochondrial

    UniProtKB/TrEMBL
    A0A3Q2HZ72, A0A9L0SGT0
    Related
    ENSECAP00000073401.1, ENSECAT00000113529.1
    Conserved Domains (1) summary
    cd05967
    Location:70 → 678
    PrpE; Propionyl-CoA synthetase (PrpE)
Nucleotide Protein
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Gene LinkOut

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