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OR4D9K olfactory receptor family 4 subfamily D member 9K [ Equus caballus (horse) ]

Gene ID: 100060524, updated on 26-Oct-2024

Summary

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Official Symbol
OR4D9Kprovided by VGNC
Official Full Name
olfactory receptor family 4 subfamily D member 9Kprovided by VGNC
Primary source
VGNC:VGNC:105266
See related
Ensembl:ENSECAG00000029673
Gene type
protein coding
RefSeq status
INFERRED
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Summary
Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. [provided by RefSeq, Jul 2008]
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Genomic context

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See OR4D9K in Genome Data Viewer
Location:
chromosome: 12
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 12 NC_009155.3 (23042119..23043054)

Chromosome 12 - NC_009155.3Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 4 subfamily D member 11F Neighboring gene olfactory receptor family 4 subfamily D member 9 Neighboring gene transfer RNA valine (anticodon UAC) Neighboring gene transfer RNA arginine (anticodon UCU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009155.3 Chromosome 12 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables olfactory receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
olfactory receptor family 4 subfamily D member 9K

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001391115.1 → NP_001378044.1  olfactory receptor family 4 subfamily D member 9K

    Status: INFERRED

    Source sequence(s)
    PJAA01000013
    UniProtKB/TrEMBL
    A0A3Q2I6K6
    Conserved Domains (1) summary
    cd15936
    Location:35 → 291
    7tmA_OR4D-like; olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009155.3 Reference EquCab3.0 Primary Assembly

    Range
    23042119..23043054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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