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CDR2L cerebellar degeneration related protein 2 like [ Equus caballus (horse) ]

Gene ID: 100060171, updated on 17-Aug-2024

Summary

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Official Symbol
CDR2Lprovided by VGNC
Official Full Name
cerebellar degeneration related protein 2 likeprovided by VGNC
Primary source
VGNC:VGNC:16374
See related
Ensembl:ENSECAG00000018760
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See CDR2L in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (6863035..6875091, complement)

Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein L58 Neighboring gene uncharacterized LOC111775591 Neighboring gene HID1 domain containing Neighboring gene otopetrin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009154.3 Chromosome 11 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
cerebellar degeneration-related protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009154.3 Reference EquCab3.0 Primary Assembly

    Range
    6863035..6875091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023652060.1 → XP_023507828.1  cerebellar degeneration-related protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A3Q2L9W6
    Related
    ENSECAP00000087443.1, ENSECAT00000120672.1
    Conserved Domains (1) summary
    cl25732
    Location:69 → 271
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_001916104.5 → XP_001916139.4  cerebellar degeneration-related protein 2-like isoform X2

    UniProtKB/TrEMBL
    A0A3Q2L9W6
    Related
    ENSECAP00000016289.3, ENSECAT00000019871.3
    Conserved Domains (1) summary
    cl25732
    Location:21 → 237
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_023652062.1 → XP_023507830.1  cerebellar degeneration-related protein 2-like isoform X3

    UniProtKB/TrEMBL
    A0A9L0T027, A0A9L0TF41
    Related
    ENSECAP00000079870.1, ENSECAT00000127286.1
    Conserved Domains (1) summary
    cl25732
    Location:19 → 221
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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