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TMEM165 transmembrane protein 165 [ Equus caballus (horse) ]

Gene ID: 100059506, updated on 17-Aug-2024

Summary

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Official Symbol
TMEM165provided by VGNC
Official Full Name
transmembrane protein 165provided by VGNC
Primary source
VGNC:VGNC:51342
See related
Ensembl:ENSECAG00000018843
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See TMEM165 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 3 NC_009146.3 (79032652..79056520, complement)

Chromosome 3 - NC_009146.3Genomic Context describing neighboring genes Neighboring gene phosducin like 2 Neighboring gene clock circadian regulator Neighboring gene uncharacterized LOC111772908 Neighboring gene steroid 5 alpha-reductase 3 Neighboring gene uncharacterized LOC106782997

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009146.3 Chromosome 3 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Golgi calcium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in manganese ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative divalent cation/proton antiporter TMEM165
Names
transmembrane protein 165-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009146.3 Reference EquCab3.0 Primary Assembly

    Range
    79032652..79056520 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003364683.3 → XP_003364731.2  putative divalent cation/proton antiporter TMEM165

    UniProtKB/TrEMBL
    A0A3Q2HHC9, F7AUZ7
    Related
    ENSECAP00000016395.2, ENSECAT00000019993.4
    Conserved Domains (1) summary
    COG2119
    Location:236 → 457
    Gdt1; Putative Ca2+/H+ antiporter, TMEM165/GDT1 family [General function prediction only]
Nucleotide Protein
Heading Accession and Version

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