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GMPPA GDP-mannose pyrophosphorylase A [ Equus caballus (horse) ]

Gene ID: 100059471, updated on 17-Aug-2024

Summary

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Official Symbol
GMPPAprovided by VGNC
Official Full Name
GDP-mannose pyrophosphorylase Aprovided by VGNC
Primary source
VGNC:VGNC:18409
See related
Ensembl:ENSECAG00000011565
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See GMPPA in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (8768543..8775624)

Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene striated muscle enriched protein kinase Neighboring gene SPEG neighbor Neighboring gene acid sensing ion channel subunit family member 4 Neighboring gene chondroitin polymerizing factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009149.3 Chromosome 6 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-1-phosphate guanyltransferase alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009149.3 Reference EquCab3.0 Primary Assembly

    Range
    8768543..8775624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023642413.1 → XP_023498181.1  mannose-1-phosphate guanyltransferase alpha isoform X1

    UniProtKB/TrEMBL
    A0A9L0SB26
    Conserved Domains (2) summary
    cd06428
    Location:4 → 266
    M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase
    cl00160
    Location:294 → 360
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

  2. XM_023642415.1 → XP_023498183.1  mannose-1-phosphate guanyltransferase alpha isoform X3

    Conserved Domains (2) summary
    cd06428
    Location:4 → 266
    M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase
    cl00160
    Location:294 → 336
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

  3. XM_023642412.1 → XP_023498180.1  mannose-1-phosphate guanyltransferase alpha isoform X1

    UniProtKB/TrEMBL
    A0A9L0SB26
    Conserved Domains (2) summary
    cd06428
    Location:4 → 266
    M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase
    cl00160
    Location:294 → 360
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

  4. XM_023642411.1 → XP_023498179.1  mannose-1-phosphate guanyltransferase alpha isoform X1

    UniProtKB/TrEMBL
    A0A9L0SB26
    Related
    ENSECAP00000073328.1, ENSECAT00000133071.1
    Conserved Domains (2) summary
    cd06428
    Location:4 → 266
    M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase
    cl00160
    Location:294 → 360
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

  5. XM_023642414.1 → XP_023498182.1  mannose-1-phosphate guanyltransferase alpha isoform X1

    UniProtKB/TrEMBL
    A0A9L0SB26
    Conserved Domains (2) summary
    cd06428
    Location:4 → 266
    M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase
    cl00160
    Location:294 → 360
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

  6. XM_005610632.3 → XP_005610689.1  mannose-1-phosphate guanyltransferase alpha isoform X2

    See identical proteins and their annotated locations for XP_005610689.1

    UniProtKB/TrEMBL
    F7BEM5
    Related
    ENSECAP00000009743.1, ENSECAT00000012341.4
    Conserved Domains (3) summary
    cd06428
    Location:4 → 261
    M1P_guanylylT_A_like_N; N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase
    COG1208
    Location:1 → 349
    GCD1; NDP-sugar pyrophosphorylase, includes eIF-2Bgamma, eIF-2Bepsilon, and LPS biosynthesis proteins [Translation, ribosomal structure and biogenesis, Cell wall/membrane/envelope biogenesis]
    cl00160
    Location:289 → 355
    LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
Nucleotide Protein
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