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ACSL5 acyl-CoA synthetase long chain family member 5 [ Equus caballus (horse) ]

Gene ID: 100059190, updated on 15-Aug-2024

Summary

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Official Symbol
ACSL5provided by VGNC
Official Full Name
acyl-CoA synthetase long chain family member 5provided by VGNC
Primary source
VGNC:VGNC:15007
See related
Ensembl:ENSECAG00000022003
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ACSL5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (19312246..19375250, complement)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene vesicle transport through interaction with t-SNAREs 1A Neighboring gene zinc finger DHHC-type palmitoyltransferase 6 Neighboring gene guanylate cyclase 2G-like Neighboring gene tectorin beta Neighboring gene glycerol-3-phosphate acyltransferase, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009144.3 Chromosome 1 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of long-chain fatty acid import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    19312246..19375250 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014733062.2 → XP_014588548.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HPZ2
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  2. XM_005602230.3 → XP_005602287.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    See identical proteins and their annotated locations for XP_005602287.1

    UniProtKB/TrEMBL
    A0A3Q2HPZ2
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  3. XM_014733064.2 → XP_014588550.1  long-chain-fatty-acid--CoA ligase 5 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2HPZ2, A0A3Q2KPY3
    Related
    ENSECAP00000025340.1, ENSECAT00000053211.2
    Conserved Domains (2) summary
    cd05927
    Location:101 → 637
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    pfam00501
    Location:102 → 548
    AMP-binding; AMP-binding enzyme

  4. XM_014733063.2 → XP_014588549.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HPZ2
    Related
    ENSECAP00000032614.2, ENSECAT00000052866.2
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  5. XM_001915998.5 → XP_001916033.3  long-chain-fatty-acid--CoA ligase 5 isoform X1

    See identical proteins and their annotated locations for XP_001916033.3

    UniProtKB/TrEMBL
    A0A3Q2HPZ2
    Related
    ENSECAP00000035311.2, ENSECAT00000059584.2
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)

  6. XM_023639341.1 → XP_023495109.1  long-chain-fatty-acid--CoA ligase 5 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HPZ2
    Conserved Domains (1) summary
    cd05927
    Location:101 → 678
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
Nucleotide Protein
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