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NAT10 N-acetyltransferase 10 [ Equus caballus (horse) ]

Gene ID: 100059185, updated on 17-Aug-2024

Summary

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Official Symbol
NAT10provided by VGNC
Official Full Name
N-acetyltransferase 10provided by VGNC
Primary source
VGNC:VGNC:58195
See related
Ensembl:ENSECAG00000011621
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See NAT10 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
31
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 12 NC_009155.3 (961005..1006204)

Chromosome 12 - NC_009155.3Genomic Context describing neighboring genes Neighboring gene cell cycle associated protein 1 Neighboring gene uncharacterized LOC111775883 Neighboring gene ankyrin repeat and BTB domain containing 2 Neighboring gene cuticlin-2-like Neighboring gene thyroid transcription factor 1-associated protein 26-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009155.3 Chromosome 12 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA cytidine N-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA acetylation involved in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA cytidine acetyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009155.3 Reference EquCab3.0 Primary Assembly

    Range
    961005..1006204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023653850.1 → XP_023509618.1  RNA cytidine acetyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A3Q2H4F8, F6SDN4
    Related
    ENSECAP00000010047.4, ENSECAT00000012721.4
    Conserved Domains (2) summary
    COG1444
    Location:20 → 936
    TmcA; tRNA(Met) C34 N-acetyltransferase TmcA [Translation, ribosomal structure and biogenesis]
    cl27612
    Location:935 → 1032
    PLN03229; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional

  2. XM_023653852.1 → XP_023509620.1  RNA cytidine acetyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A3Q2H4F8, F6SDN4
    Conserved Domains (2) summary
    COG1444
    Location:20 → 936
    TmcA; tRNA(Met) C34 N-acetyltransferase TmcA [Translation, ribosomal structure and biogenesis]
    cl27612
    Location:935 → 1032
    PLN03229; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional

  3. XM_023653851.1 → XP_023509619.1  RNA cytidine acetyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A3Q2H4F8, F6SDN4
    Conserved Domains (2) summary
    COG1444
    Location:20 → 936
    TmcA; tRNA(Met) C34 N-acetyltransferase TmcA [Translation, ribosomal structure and biogenesis]
    cl27612
    Location:935 → 1032
    PLN03229; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional

  4. XM_023653853.1 → XP_023509621.1  RNA cytidine acetyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A3Q2H4F8
    Conserved Domains (2) summary
    COG1444
    Location:20 → 930
    TmcA; tRNA(Met) C34 N-acetyltransferase TmcA [Translation, ribosomal structure and biogenesis]
    cl27612
    Location:929 → 1026
    PLN03229; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional

  5. XM_023653854.1 → XP_023509622.1  RNA cytidine acetyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A3Q2GWE7
    Related
    ENSECAP00000024799.2, ENSECAT00000037995.2
    Conserved Domains (1) summary
    COG1444
    Location:20 → 901
    TmcA; tRNA(Met) C34 N-acetyltransferase TmcA [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
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