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B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [ Equus caballus (horse) ]

Gene ID: 100058694, updated on 17-Aug-2024

Summary

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Official Symbol
B3GNT5provided by VGNC
Official Full Name
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5provided by VGNC
Primary source
VGNC:VGNC:15733
See related
Ensembl:ENSECAG00000001863
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See B3GNT5 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 19 NC_009162.3 (24046131..24074937)

Chromosome 19 - NC_009162.3Genomic Context describing neighboring genes Neighboring gene methylcrotonyl-CoA carboxylase subunit 1 Neighboring gene lysosomal associated membrane protein 3 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene E3 ubiquitin-protein ligase RNF115 pseudogene Neighboring gene 60S ribosomal protein L21 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009162.3 Chromosome 19 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
Names
UDP-glcNAc:betaga beta-1,3-N-acetylglucosaminyltransferase 5-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009162.3 Reference EquCab3.0 Primary Assembly

    Range
    24046131..24074937
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023623381.1 → XP_023479149.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    F6VC66
    Related
    ENSECAP00000070827.1, ENSECAT00000118221.1
    Conserved Domains (1) summary
    cl21608
    Location:104 → 300
    Galactosyl_T; Galactosyltransferase

  2. XM_023623382.1 → XP_023479150.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    F6VC66
    Conserved Domains (1) summary
    cl21608
    Location:104 → 300
    Galactosyl_T; Galactosyltransferase

  3. XM_023623380.1 → XP_023479148.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    F6VC66
    Related
    ENSECAP00000061454.1, ENSECAT00000129001.1
    Conserved Domains (1) summary
    cl21608
    Location:104 → 300
    Galactosyl_T; Galactosyltransferase

  4. XM_023623379.1 → XP_023479147.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    F6VC66
    Related
    ENSECAP00000056269.1, ENSECAT00000117926.1
    Conserved Domains (1) summary
    cl21608
    Location:104 → 300
    Galactosyl_T; Galactosyltransferase

  5. XM_023623384.1 → XP_023479152.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    F6VC66
    Conserved Domains (1) summary
    cl21608
    Location:104 → 300
    Galactosyl_T; Galactosyltransferase

  6. XM_023623385.1 → XP_023479153.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    F6VC66
    Related
    ENSECAP00000076549.1, ENSECAT00000108285.1
    Conserved Domains (1) summary
    cl21608
    Location:104 → 300
    Galactosyl_T; Galactosyltransferase

  7. XM_023623383.1 → XP_023479151.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    F6VC66
    Related
    ENSECAP00000064132.1, ENSECAT00000087464.1
    Conserved Domains (1) summary
    cl21608
    Location:104 → 300
    Galactosyl_T; Galactosyltransferase

  8. XM_023623386.1 → XP_023479154.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    UniProtKB/TrEMBL
    F6VC66
    Related
    ENSECAP00000068212.1, ENSECAT00000148484.1
    Conserved Domains (1) summary
    cl21608
    Location:104 → 300
    Galactosyl_T; Galactosyltransferase

RNA

  1. XR_002801756.1 RNA Sequence

  2. XR_002801757.1 RNA Sequence

  3. XR_002801759.1 RNA Sequence

  4. XR_002801758.1 RNA Sequence

  5. XR_002801760.1 RNA Sequence

Nucleotide Protein
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