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CNOT9 CCR4-NOT transcription complex subunit 9 [ Equus caballus (horse) ]

Gene ID: 100058624, updated on 17-Aug-2024

Summary

Official Symbol
CNOT9provided by VGNC
Official Full Name
CCR4-NOT transcription complex subunit 9provided by VGNC
Primary source
VGNC:VGNC:16682
See related
Ensembl:ENSECAG00000059139
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
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Genomic context

See CNOT9 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (7962229..7991868)

Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene CTD small phosphatase 1 Neighboring gene villin 1 Neighboring gene ubiquitin specific peptidase 37 Neighboring gene uncharacterized LOC111773840 Neighboring gene phospholipase C delta 4 Neighboring gene zinc finger protein 142

Genomic regions, transcripts, and products

Genomic Sequence:
NC_009149.3 Chromosome 6 Reference EquCab3.0 Primary Assembly

General protein information

Preferred Names
CCR4-NOT transcription complex subunit 9
Names
cell differentiation protein RCD1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001301266.2NP_001288195.1  CCR4-NOT transcription complex subunit 9

    See identical proteins and their annotated locations for NP_001288195.1

    Status: PROVISIONAL

    Source sequence(s)
    PJAA01000007
    UniProtKB/TrEMBL
    A0A9L0S2Y3
    Related
    ENSECAP00000007546.4, ENSECAT00000009852.4
    Conserved Domains (1) summary
    pfam04078
    Location:25283
    Rcd1; Cell differentiation family, Rcd1-like

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009149.3 Reference EquCab3.0 Primary Assembly

    Range
    7962229..7991868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005610612.3XP_005610669.1  CCR4-NOT transcription complex subunit 9 isoform X1

    See identical proteins and their annotated locations for XP_005610669.1

    UniProtKB/TrEMBL
    A0A9L0S2Y3
    Related
    ENSECAP00000053953.2, ENSECAT00000068023.2
    Conserved Domains (1) summary
    pfam04078
    Location:33244
    Rcd1; Cell differentiation family, Rcd1-like