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TTC14 tetratricopeptide repeat domain 14 [ Equus caballus (horse) ]

Gene ID: 100058491, updated on 17-Aug-2024

Summary

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Official Symbol
TTC14provided by VGNC
Official Full Name
tetratricopeptide repeat domain 14provided by VGNC
Primary source
VGNC:VGNC:24611
See related
Ensembl:ENSECAG00000014616
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See TTC14 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 19 NC_009162.3 (21828455..21838119)

Chromosome 19 - NC_009162.3Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 5 like Neighboring gene uncharacterized LOC111769029 Neighboring gene uncharacterized LOC102150894 Neighboring gene U6 spliceosomal RNA Neighboring gene coiled-coil domain 39 molecular ruler complex subunit Neighboring gene uncharacterized LOC111768984

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009162.3 Chromosome 19 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tetratricopeptide repeat protein 14
Names
Tetratricopeptide repeat protein 14-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009162.3 Reference EquCab3.0 Primary Assembly

    Range
    21828455..21838119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001495771.4 → XP_001495821.1  tetratricopeptide repeat protein 14

    See identical proteins and their annotated locations for XP_001495821.1

    UniProtKB/TrEMBL
    F7C0B1
    Related
    ENSECAP00000012491.2, ENSECAT00000015532.4
    Conserved Domains (3) summary
    smart00316
    Location:124 → 207
    S1; Ribosomal protein S1-like RNA-binding domain
    sd00006
    Location:307 → 335
    TPR; TPR repeat [structural motif]
    pfam13414
    Location:307 → 372
    TPR_11; TPR repeat

RNA

  1. XR_002801731.1 RNA Sequence

    Related
    ENSECAT00000065136.2
Nucleotide Protein
Heading Accession and Version

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