U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AFMID arylformamidase [ Equus caballus (horse) ]

Gene ID: 100057858, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
AFMIDprovided by VGNC
Official Full Name
arylformamidaseprovided by VGNC
Primary source
VGNC:VGNC:15150
See related
Ensembl:ENSECAG00000012095
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See AFMID in Genome Data Viewer
Location:
chromosome: 11
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 11 NC_009154.3 (4321092..4339991, complement)

Chromosome 11 - NC_009154.3Genomic Context describing neighboring genes Neighboring gene transmembrane protein 235 Neighboring gene baculoviral IAP repeat containing 5 Neighboring gene thymidine kinase 1 Neighboring gene chromosome 11 C17orf99 homolog Neighboring gene uncharacterized LOC111775578 Neighboring gene synaptogyrin 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_009154.3 Chromosome 11 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arylformamidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan catabolic process to kynurenine IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
kynurenine formamidase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009154.3 Reference EquCab3.0 Primary Assembly

    Range
    4321092..4339991 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023651908.1 → XP_023507676.1  kynurenine formamidase isoform X2

    UniProtKB/TrEMBL
    A0A9L0SWF1
    Conserved Domains (1) summary
    COG0657
    Location:81 → 296
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  2. XM_023651907.1 → XP_023507675.1  kynurenine formamidase isoform X1

    UniProtKB/TrEMBL
    A0A9L0RMZ6
    Related
    ENSECAP00000064137.1, ENSECAT00000132237.1
    Conserved Domains (1) summary
    COG0657
    Location:143 → 358
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  3. XM_023651910.1 → XP_023507678.1  kynurenine formamidase isoform X6

    UniProtKB/TrEMBL
    A0A9L0SWF1
    Conserved Domains (1) summary
    COG0657
    Location:58 → 273
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  4. XM_014738295.2 → XP_014593781.1  kynurenine formamidase isoform X5

    UniProtKB/TrEMBL
    A0A9L0RYB4
    Related
    ENSECAP00000009993.3, ENSECAT00000012647.4
    Conserved Domains (2) summary
    pfam12697
    Location:86 → 277
    Abhydrolase_6; Alpha/beta hydrolase family
    cl21494
    Location:86 → 276
    Abhydrolase; alpha/beta hydrolases

  5. XM_023651909.1 → XP_023507677.1  kynurenine formamidase isoform X4

    UniProtKB/TrEMBL
    A0A9L0SWF1, A0A9L0TRA5
    Related
    ENSECAP00000088888.1, ENSECAT00000109276.1
    Conserved Domains (1) summary
    COG0657
    Location:65 → 280
    Aes; Acetyl esterase/lipase [Lipid transport and metabolism]

  6. XM_001491048.6 → XP_001491098.3  kynurenine formamidase isoform X3

    See identical proteins and their annotated locations for XP_001491098.3

    UniProtKB/TrEMBL
    A0A9L0SWF1
    Related
    ENSECAP00000079187.1, ENSECAT00000117220.1
    Conserved Domains (2) summary
    pfam12697
    Location:90 → 281
    Abhydrolase_6; Alpha/beta hydrolase family
    cl21494
    Location:90 → 280
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.