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ALDH1A3 aldehyde dehydrogenase 1 family member A3 [ Equus caballus (horse) ]

Gene ID: 100057072, updated on 17-Aug-2024

Summary

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Official Symbol
ALDH1A3provided by VGNC
Official Full Name
aldehyde dehydrogenase 1 family member A3provided by VGNC
Primary source
VGNC:VGNC:15230
See related
Ensembl:ENSECAG00000008871
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ALDH1A3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (106951661..106988777)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene lines homolog 1 Neighboring gene ankyrin repeat and SOCS box containing 7 Neighboring gene U7 small nuclear RNA Neighboring gene leucine rich repeat kinase 1 Neighboring gene uncharacterized LOC111775447

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009144.3 Chromosome 1 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldehyde dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinaldehyde dehydrogenase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    106951661..106988777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001490555.6 → XP_001490605.2  retinaldehyde dehydrogenase 3 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2IDL1
    Related
    ENSECAP00000045855.2, ENSECAT00000057819.2
    Conserved Domains (2) summary
    cd07141
    Location:26 → 506
    ALDH_F1AB_F2_RALDH1; NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like
    PLN02466
    Location:19 → 512
    PLN02466; aldehyde dehydrogenase family 2 member

  2. XM_023651467.1 → XP_023507235.1  retinaldehyde dehydrogenase 3 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2IDL1, A0A9L0TR06
    Related
    ENSECAP00000089082.1, ENSECAT00000144451.1
    Conserved Domains (1) summary
    cd07141
    Location:15 → 487
    ALDH_F1AB_F2_RALDH1; NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like
Nucleotide Protein
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