U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

OGT O-linked N-acetylglucosamine (GlcNAc) transferase [ Equus caballus (horse) ]

Gene ID: 100056148, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Official Symbol
OGTprovided by VGNC
Official Full Name
O-linked N-acetylglucosamine (GlcNAc) transferaseprovided by VGNC
Primary source
VGNC:VGNC:55501
See related
Ensembl:ENSECAG00000023721
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See OGT in Genome Data Viewer
Location:
chromosome: X
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) X NC_009175.3 (56416124..56448897)

Chromosome X - NC_009175.3Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain-containing family B member 2 pseudogene Neighboring gene suppressor of cytokine signaling 6-like Neighboring gene germ cell nuclear acidic peptidase Neighboring gene C-X-C motif chemokine receptor 3

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_009175.3 Chromosome X Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein O-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
Names
O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)
UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kda subunit-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009175.3 Reference EquCab3.0 Primary Assembly

    Range
    56416124..56448897
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005614262.3 → XP_005614319.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X3

    UniProtKB/TrEMBL
    A0A3Q2HQQ6
    Conserved Domains (3) summary
    TIGR02917
    Location:5 → 448
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:310 → 338
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:459 → 999
    Glyco_transf_41; Glycosyl transferase family 41

  2. XM_001493372.5 → XP_001493422.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X1

    See identical proteins and their annotated locations for XP_001493422.1

    UniProtKB/TrEMBL
    A0A3Q2HQQ6, F6Z4I6
    Related
    ENSECAP00000021460.1, ENSECAT00000025778.4
    Conserved Domains (3) summary
    TIGR02917
    Location:22 → 465
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:327 → 355
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:476 → 1016
    Glyco_transf_41; Glycosyl transferase family 41

  3. XM_001493388.5 → XP_001493438.1  UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit isoform X2

    See identical proteins and their annotated locations for XP_001493438.1

    UniProtKB/TrEMBL
    A0A3Q2HQQ6
    Conserved Domains (3) summary
    TIGR02917
    Location:23 → 455
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:317 → 345
    TPR; TPR repeat [structural motif]
    pfam13844
    Location:466 → 1006
    Glyco_transf_41; Glycosyl transferase family 41
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.