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ACSS2 acyl-CoA synthetase short chain family member 2 [ Equus caballus (horse) ]

Gene ID: 100054562, updated on 17-Aug-2024

Summary

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Official Symbol
ACSS2provided by VGNC
Official Full Name
acyl-CoA synthetase short chain family member 2provided by VGNC
Primary source
VGNC:VGNC:15010
See related
Ensembl:ENSECAG00000016389
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ACSS2 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 22 NC_009165.3 (26611578..26658945)

Chromosome 22 - NC_009165.3Genomic Context describing neighboring genes Neighboring gene nuclear receptor coactivator 6 Neighboring gene gamma-glutamyltransferase 7 Neighboring gene 40S ribosomal protein S9 pseudogene Neighboring gene glutathione synthetase Neighboring gene myosin heavy chain 7B Neighboring gene microRNA mir-499

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009165.3 Chromosome 22 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-coenzyme A synthetase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009165.3 Reference EquCab3.0 Primary Assembly

    Range
    26611578..26658945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003363913.4 → XP_003363961.1  acetyl-coenzyme A synthetase, cytoplasmic isoform X1

    UniProtKB/TrEMBL
    A0A9L0S247, A0A9L0SS95
    Related
    ENSECAP00000070185.1, ENSECAT00000140917.1
    Conserved Domains (2) summary
    cd05966
    Location:56 → 703
    ACS; Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)
    PRK00174
    Location:36 → 710
    PRK00174; acetyl-CoA synthetase; Provisional

  2. XM_001501341.4 → XP_001501391.1  acetyl-coenzyme A synthetase, cytoplasmic isoform X2

    UniProtKB/TrEMBL
    A0A9L0SP29, A0A9L0SS95
    Related
    ENSECAP00000076691.1, ENSECAT00000125237.1
    Conserved Domains (2) summary
    cd05966
    Location:56 → 690
    ACS; Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme)
    PRK00174
    Location:36 → 697
    PRK00174; acetyl-CoA synthetase; Provisional
Nucleotide Protein
Heading Accession and Version

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