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ACSL4 acyl-CoA synthetase long chain family member 4 [ Equus caballus (horse) ]

Gene ID: 100054459, updated on 17-Aug-2024

Summary

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Official Symbol
ACSL4provided by VGNC
Official Full Name
acyl-CoA synthetase long chain family member 4provided by VGNC
Primary source
VGNC:VGNC:15006
See related
Ensembl:ENSECAG00000016854
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ACSL4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) X NC_009175.3 (90598268..90687294, complement)

Chromosome X - NC_009175.3Genomic Context describing neighboring genes Neighboring gene nuclear transport factor 2 like export factor 2 Neighboring gene potassium voltage-gated channel subfamily E regulatory subunit 5 Neighboring gene uncharacterized LOC111771635 Neighboring gene transmembrane protein 164 Neighboring gene microRNA mir-652

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009175.3 Chromosome X Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009175.3 Reference EquCab3.0 Primary Assembly

    Range
    90598268..90687294 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023634021.1 → XP_023489789.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HVP9
    Related
    ENSECAP00000039200.2, ENSECAT00000036862.3
    Conserved Domains (2) summary
    cd05927
    Location:121 → 708
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PRK07868
    Location:48 → 167
    PRK07868; acyl-CoA synthetase; Validated

  2. XM_023634024.1 → XP_023489792.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A5F5PIE5, F7AYT5
    Related
    ENSECAP00000014924.4, ENSECAT00000018304.4
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PRK07868
    Location:7 → 126
    PRK07868; acyl-CoA synthetase; Validated

  3. XM_023634022.1 → XP_023489790.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A5F5PIE5, F7AYT5
    Related
    ENSECAP00000052082.2, ENSECAT00000073812.2
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PRK07868
    Location:7 → 126
    PRK07868; acyl-CoA synthetase; Validated

  4. XM_023634023.1 → XP_023489791.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A5F5PIE5, F7AYT5
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PRK07868
    Location:7 → 126
    PRK07868; acyl-CoA synthetase; Validated
Nucleotide Protein
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