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AMACR alpha-methylacyl-CoA racemase [ Equus caballus (horse) ]

Gene ID: 100054088, updated on 15-Aug-2024

Summary

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Gene symbol
AMACR
Gene description
alpha-methylacyl-CoA racemase
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See AMACR in Genome Data Viewer
Location:
chromosome: 21
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 21 NC_009164.3 (31667226..31683119)

Chromosome 21 - NC_009164.3Genomic Context describing neighboring genes Neighboring gene retinoic acid induced 14 Neighboring gene C1q and TNF related 3 Neighboring gene solute carrier family 45 member 2 Neighboring gene relaxin family peptide receptor 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009164.3 Chromosome 21 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-methylacyl-CoA racemase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-methylacyl-CoA racemase
Names
Alpha-methylacyl-CoA racemase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009164.3 Reference EquCab3.0 Primary Assembly

    Range
    31667226..31683119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005604321.3 → XP_005604378.1  alpha-methylacyl-CoA racemase

    See identical proteins and their annotated locations for XP_005604378.1

    Conserved Domains (1) summary
    COG1804
    Location:3 → 373
    CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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