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GALM galactose mutarotase [ Equus caballus (horse) ]

Gene ID: 100054079, updated on 17-Aug-2024

Summary

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Official Symbol
GALMprovided by VGNC
Official Full Name
galactose mutarotaseprovided by VGNC
Primary source
VGNC:VGNC:18221
See related
Ensembl:ENSECAG00000014430
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See GALM in Genome Data Viewer
Location:
chromosome: 15
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 15 NC_009158.3 (60213911..60272945, complement)

Chromosome 15 - NC_009158.3Genomic Context describing neighboring genes Neighboring gene gem nuclear organelle associated protein 6 Neighboring gene tetratricopeptide repeat domain 39D Neighboring gene serine and arginine rich splicing factor 7 Neighboring gene heterogeneous nuclear ribonucleoprotein L like Neighboring gene cell death activator CIDE-3 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009158.3 Chromosome 15 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldose 1-epimerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactose catabolic process via UDP-galactose IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose mutarotase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009158.3 Reference EquCab3.0 Primary Assembly

    Range
    60213911..60272945 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023619209.1 → XP_023474977.1  galactose mutarotase isoform X2

    UniProtKB/TrEMBL
    A0A3Q2HL03
    Conserved Domains (1) summary
    cd09019
    Location:29 → 259
    galactose_mutarotase_like; galactose mutarotase_like

  2. XM_001500603.4 → XP_001500653.1  galactose mutarotase isoform X1

    See identical proteins and their annotated locations for XP_001500653.1

    UniProtKB/TrEMBL
    A0A9L0TD93
    Related
    ENSECAP00000085101.1, ENSECAT00000094966.1
    Conserved Domains (1) summary
    cd09019
    Location:29 → 339
    galactose_mutarotase_like; galactose mutarotase_like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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