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PIP4K2C phosphatidylinositol-5-phosphate 4-kinase type 2 gamma [ Equus caballus (horse) ]

Gene ID: 100053518, updated on 17-Aug-2024

Summary

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Official Symbol
PIP4K2Cprovided by VGNC
Official Full Name
phosphatidylinositol-5-phosphate 4-kinase type 2 gammaprovided by VGNC
Primary source
VGNC:VGNC:21464
See related
Ensembl:ENSECAG00000013449
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PIP4K2C in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (76086804..76097711)

Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene dynactin subunit 2 Neighboring gene kinesin family member 5A Neighboring gene deltex E3 ubiquitin ligase 3 Neighboring gene Rho guanine nucleotide exchange factor 25

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009149.3 Chromosome 6 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-4-phosphate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 1-phosphatidylinositol-5-phosphate 4-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 5-phosphate 4-kinase type-2 gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009149.3 Reference EquCab3.0 Primary Assembly

    Range
    76086804..76097711
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023643880.1 → XP_023499648.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X3

    UniProtKB/TrEMBL
    A0A5F5PXP3, F6ZUR6
    Related
    ENSECAP00000053393.2, ENSECAT00000072534.2
    Conserved Domains (1) summary
    smart00330
    Location:72 → 382
    PIPKc; Phosphatidylinositol phosphate kinases

  2. XM_023643877.1 → XP_023499645.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X1

    UniProtKB/TrEMBL
    F6ZUR6
    Conserved Domains (1) summary
    smart00330
    Location:72 → 420
    PIPKc; Phosphatidylinositol phosphate kinases

  3. XM_023643878.1 → XP_023499646.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X1

    UniProtKB/TrEMBL
    F6ZUR6
    Conserved Domains (1) summary
    smart00330
    Location:72 → 420
    PIPKc; Phosphatidylinositol phosphate kinases

  4. XM_023643879.1 → XP_023499647.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X2

    UniProtKB/TrEMBL
    F6ZUR6
    Related
    ENSECAP00000011321.3, ENSECAT00000014187.3
    Conserved Domains (1) summary
    smart00330
    Location:72 → 407
    PIPKc; Phosphatidylinositol phosphate kinases

  5. XM_023643881.1 → XP_023499649.1  phosphatidylinositol 5-phosphate 4-kinase type-2 gamma isoform X4

    UniProtKB/TrEMBL
    F6ZUR6
    Conserved Domains (1) summary
    cl28923
    Location:1 → 349
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family
Nucleotide Protein
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