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PIGF phosphatidylinositol glycan anchor biosynthesis class F [ Equus caballus (horse) ]

Gene ID: 100053298, updated on 17-Aug-2024

Summary

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Official Symbol
PIGFprovided by VGNC
Official Full Name
phosphatidylinositol glycan anchor biosynthesis class Fprovided by VGNC
Primary source
VGNC:VGNC:21422
See related
Ensembl:ENSECAG00000012487
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PIGF in Genome Data Viewer
Location:
chromosome: 15
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 15 NC_009158.3 (53330095..53362564)

Chromosome 15 - NC_009158.3Genomic Context describing neighboring genes Neighboring gene suppressor of cytokine signaling 5 Neighboring gene CXXC repeat containing interactor of PDZ3 domain Neighboring gene ras homolog family member Q Neighboring gene ATPase H+ transporting V1 subunit E2 Neighboring gene transmembrane protein 247

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009158.3 Chromosome 15 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-glycan biosynthesis class F protein
Names
phosphatidylinositol-glycan biosynthesis class protein-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009158.3 Reference EquCab3.0 Primary Assembly

    Range
    53330095..53362564
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001498796.4 → XP_001498846.1  phosphatidylinositol-glycan biosynthesis class F protein

    See identical proteins and their annotated locations for XP_001498846.1

    UniProtKB/TrEMBL
    F6SYH3, K9K380
    Conserved Domains (1) summary
    pfam06699
    Location:27 → 204
    PIG-F; GPI biosynthesis protein family Pig-F

  2. XM_005600003.3 → XP_005600060.1  phosphatidylinositol-glycan biosynthesis class F protein

    See identical proteins and their annotated locations for XP_005600060.1

    UniProtKB/TrEMBL
    F6SYH3, K9K380
    Related
    ENSECAP00000010229.1, ENSECAT00000012937.4
    Conserved Domains (1) summary
    pfam06699
    Location:27 → 204
    PIG-F; GPI biosynthesis protein family Pig-F
Nucleotide Protein
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Molecular Biology Databases
Research Materials