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UBOX5 U-box domain containing 5 [ Equus caballus (horse) ]

Gene ID: 100052706, updated on 17-Aug-2024

Summary

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Official Symbol
UBOX5provided by VGNC
Official Full Name
U-box domain containing 5provided by VGNC
Primary source
VGNC:VGNC:24743
See related
Ensembl:ENSECAG00000024708
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See UBOX5 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 22 NC_009165.3 (20153463..20186108)

Chromosome 22 - NC_009165.3Genomic Context describing neighboring genes Neighboring gene DDRGK domain containing 1 Neighboring gene leucine zipper tumor suppressor family member 3 Neighboring gene FAST kinase domains 5 Neighboring gene arginine vasopressin Neighboring gene oxytocin/neurophysin I prepropeptide

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009165.3 Chromosome 22 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin-ubiquitin ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RING finger protein 37

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009165.3 Reference EquCab3.0 Primary Assembly

    Range
    20153463..20186108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023626214.1 → XP_023481982.1  RING finger protein 37 isoform X1

    UniProtKB/TrEMBL
    A0A5F5Q016
    Conserved Domains (2) summary
    cd16537
    Location:482 → 528
    RING-HC_RNF37; RING finger, HC subclass, found in RING finger protein 37 (RNF37)
    cd16660
    Location:260 → 312
    RING-Ubox_RNF37; U-box domain, a modified RING finger, found in RING finger protein 37 (RNF37)

  2. XM_023626216.1 → XP_023481984.1  RING finger protein 37 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2KP93
    Conserved Domains (1) summary
    cd16660
    Location:260 → 312
    RING-Ubox_RNF37; U-box domain, a modified RING finger, found in RING finger protein 37 (RNF37)

  3. XM_014735066.2 → XP_014590552.2  RING finger protein 37 isoform X1

    UniProtKB/TrEMBL
    A0A5F5Q016
    Conserved Domains (2) summary
    cd16537
    Location:482 → 528
    RING-HC_RNF37; RING finger, HC subclass, found in RING finger protein 37 (RNF37)
    cd16660
    Location:260 → 312
    RING-Ubox_RNF37; U-box domain, a modified RING finger, found in RING finger protein 37 (RNF37)

  4. XM_023626215.1 → XP_023481983.1  RING finger protein 37 isoform X1

    UniProtKB/TrEMBL
    A0A5F5Q016
    Related
    ENSECAP00000025015.2, ENSECAT00000059313.2
    Conserved Domains (2) summary
    cd16537
    Location:482 → 528
    RING-HC_RNF37; RING finger, HC subclass, found in RING finger protein 37 (RNF37)
    cd16660
    Location:260 → 312
    RING-Ubox_RNF37; U-box domain, a modified RING finger, found in RING finger protein 37 (RNF37)
Nucleotide Protein
Heading Accession and Version

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