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ANTXR2 ANTXR cell adhesion molecule 2 [ Equus caballus (horse) ]

Gene ID: 100051770, updated on 17-Aug-2024

Summary

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Official Symbol
ANTXR2provided by VGNC
Official Full Name
ANTXR cell adhesion molecule 2provided by VGNC
Primary source
VGNC:VGNC:15359
See related
Ensembl:ENSECAG00000017827
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ANTXR2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 3 NC_009146.3 (58090608..58229361)

Chromosome 3 - NC_009146.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111772873 Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene PR/SET domain 8 Neighboring gene 10 kDa heat shock protein, mitochondrial pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene glycerol kinase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009146.3 Chromosome 3 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anthrax toxin receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009146.3 Reference EquCab3.0 Primary Assembly

    Range
    58090608..58229361
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003364684.4 → XP_003364732.1  anthrax toxin receptor 2 isoform X2

    UniProtKB/TrEMBL
    A0A9L0RHQ0
    Related
    ENSECAP00000062341.1, ENSECAT00000097792.1
    Conserved Domains (3) summary
    pfam05586
    Location:317 → 409
    Ant_C; Anthrax receptor C-terminus region
    pfam05587
    Location:146 → 240
    Anth_Ig; Anthrax receptor extracellular domain
    cl00057
    Location:1 → 144
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

  2. XM_001492585.5 → XP_001492635.1  anthrax toxin receptor 2 isoform X1

    See identical proteins and their annotated locations for XP_001492635.1

    UniProtKB/TrEMBL
    A0A9L0S7L1
    Related
    ENSECAP00000072116.1, ENSECAT00000124227.1
    Conserved Domains (3) summary
    cd01474
    Location:39 → 221
    vWA_ATR; ATR (Anthrax Toxin Receptor): Anthrax toxin is a key virulence factor for Bacillus anthracis, the causative agent of anthrax. ATR is the cellular receptor for the anthrax protective antigen and facilitates entry of the toxin into cells. The VWA domain in ...
    pfam05586
    Location:394 → 486
    Ant_C; Anthrax receptor C-terminus region
    pfam05587
    Location:223 → 317
    Anth_Ig; Anthrax receptor extracellular domain
Nucleotide Protein
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