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KIRREL2 kirre like nephrin family adhesion molecule 2 [ Equus caballus (horse) ]

Gene ID: 100051677, updated on 17-Aug-2024

Summary

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Official Symbol
KIRREL2provided by VGNC
Official Full Name
kirre like nephrin family adhesion molecule 2provided by VGNC
Primary source
VGNC:VGNC:19430
See related
Ensembl:ENSECAG00000016877
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See KIRREL2 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (7155532..7166173)

Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene proline dehydrogenase 2 Neighboring gene NPHS1 adhesion molecule, nephrin Neighboring gene amyloid beta precursor like protein 1 Neighboring gene NFKB inhibitor delta Neighboring gene hematopoietic cell signal transducer

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 2
Names
kin of IRRE like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009153.3 Reference EquCab3.0 Primary Assembly

    Range
    7155532..7166173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014733052.2 → XP_014588538.2  kin of IRRE-like protein 2

    UniProtKB/TrEMBL
    A0A3Q2KS42
    Related
    ENSECAP00000026470.2, ENSECAT00000033494.3
    Conserved Domains (3) summary
    smart00410
    Location:128 → 217
    IG_like; Immunoglobulin like
    pfam13927
    Location:410 → 476
    Ig_3; Immunoglobulin domain
    cl11960
    Location:495 → 599
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials