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MDH1 malate dehydrogenase 1 [ Equus caballus (horse) ]

Gene ID: 100051612, updated on 17-Aug-2024

Summary

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Official Symbol
MDH1provided by VGNC
Official Full Name
malate dehydrogenase 1provided by VGNC
Primary source
VGNC:VGNC:20056
See related
Ensembl:ENSECAG00000010849
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See MDH1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 15 NC_009158.3 (38952926..38972102, complement)

Chromosome 15 - NC_009158.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102149985 Neighboring gene uncharacterized LOC111768091 Neighboring gene WD repeat containing planar cell polarity effector Neighboring gene uncharacterized LOC111768007 Neighboring gene orthodenticle homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009158.3 Chromosome 15 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-malate dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NADH metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in malate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oxaloacetate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
malate dehydrogenase, cytoplasmic
Names
malate dehydrogenase 1, NAD (soluble)
malate dehydrogenase, cytoplasmic-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009158.3 Reference EquCab3.0 Primary Assembly

    Range
    38952926..38972102 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001494265.5 → XP_001494315.1  malate dehydrogenase, cytoplasmic

    UniProtKB/TrEMBL
    A0A9L0S5Z4
    Related
    ENSECAP00000008897.2, ENSECAT00000011388.4
    Conserved Domains (2) summary
    TIGR01759
    Location:2 → 327
    MalateDH-SF1; malate dehydrogenase
    cd01336
    Location:3 → 328
    MDH_cytoplasmic_cytosolic; Cytoplasmic and cytosolic Malate dehydrogenases
Nucleotide Protein
Heading Accession and Version

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