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RDH5 retinol dehydrogenase 5 [ Equus caballus (horse) ]

Gene ID: 100051379, updated on 17-Aug-2024

Summary

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Official Symbol
RDH5provided by VGNC
Official Full Name
retinol dehydrogenase 5provided by VGNC
Primary source
VGNC:VGNC:22281
See related
Ensembl:ENSECAG00000019692
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See RDH5 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 6 NC_009149.3 (74412049..74417113)

Chromosome 6 - NC_009149.3Genomic Context describing neighboring genes Neighboring gene integrin subunit alpha 7 Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 1 Neighboring gene CD63 molecule Neighboring gene growth differentiation factor 11 Neighboring gene SAP domain containing ribonucleoprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009149.3 Chromosome 6 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables all-trans-retinol dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in retinoid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in steroid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinol dehydrogenase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009149.3 Reference EquCab3.0 Primary Assembly

    Range
    74412049..74417113
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001504776.4 → XP_001504826.1  retinol dehydrogenase 5

    See identical proteins and their annotated locations for XP_001504826.1

    UniProtKB/TrEMBL
    F7CLW5
    Related
    ENSECAP00000017236.1, ENSECAT00000020962.3
    Conserved Domains (2) summary
    PRK08017
    Location:31 → 308
    PRK08017; oxidoreductase; Provisional
    cl21454
    Location:30 → 306
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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