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LMAN2L lectin, mannose binding 2 like [ Equus caballus (horse) ]

Gene ID: 100051330, updated on 17-Aug-2024

Summary

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Official Symbol
LMAN2Lprovided by VGNC
Official Full Name
lectin, mannose binding 2 likeprovided by VGNC
Primary source
VGNC:VGNC:19700
See related
Ensembl:ENSECAG00000013850
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: 15
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 15 NC_009158.3 (12115385..12140193)

Chromosome 15 - NC_009158.3Genomic Context describing neighboring genes Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3 Neighboring gene microRNA mir-9144 Neighboring gene fer-1 like family member 5 Neighboring gene KAT8 regulatory NSL complex subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009158.3 Chromosome 15 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009158.3 Reference EquCab3.0 Primary Assembly

    Range
    12115385..12140193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023618654.1 → XP_023474422.1  VIP36-like protein isoform X3

    Conserved Domains (1) summary
    cl14058
    Location:18 → 265
    lectin_L-type; legume lectins

  2. XM_023618656.1 → XP_023474424.1  VIP36-like protein isoform X5

    UniProtKB/TrEMBL
    A0A3Q2L8J8, F7BFL3
    Related
    ENSECAP00000011774.4, ENSECAT00000014714.4
    Conserved Domains (1) summary
    cl14058
    Location:21 → 153
    lectin_L-type; legume lectins

  3. XM_003362917.4 → XP_003362965.1  VIP36-like protein isoform X1

    Conserved Domains (1) summary
    cl14058
    Location:50 → 309
    lectin_L-type; legume lectins

  4. XM_001492041.5 → XP_001492091.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    F7BFL3
    Conserved Domains (1) summary
    cl14058
    Location:50 → 298
    lectin_L-type; legume lectins

  5. XM_023618655.1 → XP_023474423.1  VIP36-like protein isoform X4

    Conserved Domains (1) summary
    cl14058
    Location:2 → 235
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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