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MAEL maelstrom spermatogenic transposon silencer [ Equus caballus (horse) ]

Gene ID: 100051291, updated on 17-Aug-2024

Summary

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Official Symbol
MAELprovided by VGNC
Official Full Name
maelstrom spermatogenic transposon silencerprovided by VGNC
Primary source
VGNC:VGNC:19889
See related
Ensembl:ENSECAG00000015077
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See MAEL in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 5 NC_009148.3 (3665344..3691313)

Chromosome 5 - NC_009148.3Genomic Context describing neighboring genes Neighboring gene transcriptional adaptor 1 Neighboring gene immunoglobulin like domain containing receptor 2 Neighboring gene glycoprotein A33 Neighboring gene serine/threonine/tyrosine interacting like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009148.3 Chromosome 5 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in male meiotic nuclear division IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of miRNA-mediated gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein maelstrom homolog
Names
maelstrom homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009148.3 Reference EquCab3.0 Primary Assembly

    Range
    3665344..3691313
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001492846.5 → XP_001492896.1  protein maelstrom homolog

    See identical proteins and their annotated locations for XP_001492896.1

    UniProtKB/TrEMBL
    A0A5F5PPN0
    Related
    ENSECAP00000050393.1, ENSECAT00000070360.2
    Conserved Domains (2) summary
    pfam09011
    Location:5 → 72
    HMG_box_2; HMG-box domain
    pfam13017
    Location:130 → 326
    Maelstrom; piRNA pathway germ-plasm component
Nucleotide Protein
Heading Accession and Version

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