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GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic [ Equus caballus (horse) ]

Gene ID: 100051032, updated on 17-Aug-2024

Summary

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Official Symbol
GAPDHSprovided by VGNC
Official Full Name
glyceraldehyde-3-phosphate dehydrogenase, spermatogenicprovided by VGNC
Primary source
VGNC:VGNC:18243
See related
Ensembl:ENSECAG00000003757
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See GAPDHS in Genome Data Viewer
Location:
chromosome: 10
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (6743564..6753448)

Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene dermokine Neighboring gene suprabasin Neighboring gene transmembrane protein 147 Neighboring gene ATPase H+/K+ transporting subunit alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glyceraldehyde-3-phosphate dehydrogenase, testis-specific

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009153.3 Reference EquCab3.0 Primary Assembly

    Range
    6743564..6753448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001491988.6 → XP_001492038.3  glyceraldehyde-3-phosphate dehydrogenase, testis-specific isoform X1

    See identical proteins and their annotated locations for XP_001492038.3

    UniProtKB/TrEMBL
    A0A3Q2LU41
    Related
    ENSECAP00000046394.2, ENSECAT00000056548.3
    Conserved Domains (3) summary
    COG0057
    Location:66 → 396
    GapA; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]
    pfam00044
    Location:66 → 212
    Gp_dh_N; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
    pfam02800
    Location:217 → 374
    Gp_dh_C; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain

  2. XM_023649564.1 → XP_023505332.1  glyceraldehyde-3-phosphate dehydrogenase, testis-specific isoform X3

    Conserved Domains (1) summary
    cl27764
    Location:5 → 309
    Gp_dh_N; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

  3. XM_005596160.3 → XP_005596217.1  glyceraldehyde-3-phosphate dehydrogenase, testis-specific isoform X2

    See identical proteins and their annotated locations for XP_005596217.1

    UniProtKB/TrEMBL
    A0A5F5PLD3
    Related
    ENSECAP00000048679.1, ENSECAT00000068295.2
    Conserved Domains (3) summary
    COG0057
    Location:55 → 385
    GapA; Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]
    pfam00044
    Location:55 → 201
    Gp_dh_N; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
    pfam02800
    Location:206 → 363
    Gp_dh_C; Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
Nucleotide Protein
Heading Accession and Version

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