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TOR1AIP2 torsin 1A interacting protein 2 [ Equus caballus (horse) ]

Gene ID: 100050862, updated on 17-Aug-2024

Summary

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Official Symbol
TOR1AIP2provided by VGNC
Official Full Name
torsin 1A interacting protein 2provided by VGNC
Primary source
VGNC:VGNC:50898
See related
Ensembl:ENSECAG00000023572
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See TOR1AIP2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 5 NC_009148.3 (14565643..14602051, complement)

Chromosome 5 - NC_009148.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102151016 Neighboring gene family with sequence similarity 163 member A Neighboring gene torsin-1A-interacting protein 2 Neighboring gene torsin 1A interacting protein 1 Neighboring gene centrosomal protein 350 Neighboring gene uncharacterized LOC111773456 Neighboring gene quiescin sulfhydryl oxidase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009148.3 Chromosome 5 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2
Names
torsin A interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009148.3 Reference EquCab3.0 Primary Assembly

    Range
    14565643..14602051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023640647.1 → XP_023496415.1  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    A0A9L0R8V7, F6U4U7
    Conserved Domains (1) summary
    pfam05609
    Location:17 → 469
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_005609757.3 → XP_005609814.1  torsin-1A-interacting protein 2

    See identical proteins and their annotated locations for XP_005609814.1

    UniProtKB/TrEMBL
    A0A9L0R8V7, F6U4U7
    Conserved Domains (1) summary
    pfam05609
    Location:17 → 469
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_023640646.1 → XP_023496414.1  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    A0A9L0R8V7, F6U4U7
    Related
    ENSECAP00000064636.1, ENSECAT00000090550.1
    Conserved Domains (1) summary
    pfam05609
    Location:17 → 469
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  4. XM_014739595.2 → XP_014595081.1  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    A0A9L0R8V7, F6U4U7
    Related
    ENSECAP00000061383.1, ENSECAT00000082382.1
    Conserved Domains (1) summary
    pfam05609
    Location:17 → 469
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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