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ALDH6A1 aldehyde dehydrogenase 6 family member A1 [ Equus caballus (horse) ]

Gene ID: 100050834, updated on 17-Aug-2024

Summary

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Official Symbol
ALDH6A1provided by VGNC
Official Full Name
aldehyde dehydrogenase 6 family member A1provided by VGNC
Primary source
VGNC:VGNC:15238
See related
Ensembl:ENSECAG00000009453
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ALDH6A1 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 24 NC_009167.3 (19556872..19575127, complement)

Chromosome 24 - NC_009167.3Genomic Context describing neighboring genes Neighboring gene coenzyme Q6, monooxygenase Neighboring gene ectonucleoside triphosphate diphosphohydrolase 5 (inactive) Neighboring gene basal body orientation factor 1 Neighboring gene lin-52 DREAM MuvB core complex component Neighboring gene small ubiquitin-related modifier 2 pseudogene Neighboring gene visual system homeobox 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009167.3 Chromosome 24 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables malonate-semialdehyde dehydrogenase (acetylating) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in thymine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in valine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009167.3 Reference EquCab3.0 Primary Assembly

    Range
    19556872..19575127 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001490403.6 → XP_001490453.1  methylmalonate-semialdehyde/malonate-semialdehyde dehydrogenase [acylating], mitochondrial

    See identical proteins and their annotated locations for XP_001490453.1

    UniProtKB/TrEMBL
    F6Z1Y2
    Related
    ENSECAP00000007658.2, ENSECAT00000009974.3
    Conserved Domains (1) summary
    cd07085
    Location:39 → 514
    ALDH_F6_MMSDH; Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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