The following sections contain reference sequences that belong to a specific genome build. Explain

This section includes genomic Reference Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate assemblies. Model RNAs and proteins are also reported here.

Reference EquCab3.0 Primary Assembly

Genomic

1. NC_009161.3 Reference EquCab3.0 Primary Assembly

   Range

   5857249..6639147 complement

   Download

   GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

1. XM_014732391.2 → XP_014587877.1  contactin-associated protein-like 5

   UniProtKB/TrEMBL

   A0A9L0TC92, F6QSR8

   Related

   ENSECAP00000022874.2, ENSECAT00000029118.4

   Conserved Domains (6) summary

   smart00231
   Location:30 → 174

   FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain

   cd00054
   Location:961 → 996

   EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

   cd00057
   Location:34 → 173

   FA58C; Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes.

   cd00110
   Location:793 → 937

   LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...

   pfam00008
   Location:551 → 582

   EGF; EGF-like domain

   pfam02210
   Location:209 → 338

   Laminin_G_2; Laminin G domain