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PIGN phosphatidylinositol glycan anchor biosynthesis class N [ Equus caballus (horse) ]

Gene ID: 100050704, updated on 17-Aug-2024

Summary

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Official Symbol
PIGNprovided by VGNC
Official Full Name
phosphatidylinositol glycan anchor biosynthesis class Nprovided by VGNC
Primary source
VGNC:VGNC:21428
See related
Ensembl:ENSECAG00000000728
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PIGN in Genome Data Viewer
Location:
chromosome: 8
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 8 NC_009151.3 (82004462..82136486, complement)

Chromosome 8 - NC_009151.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102149289 Neighboring gene cadherin 20 Neighboring gene ring finger protein 152 Neighboring gene RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing Neighboring gene TNF receptor superfamily member 11a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009151.3 Chromosome 8 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose-ethanolamine phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI ethanolamine phosphate transferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009151.3 Reference EquCab3.0 Primary Assembly

    Range
    82004462..82136486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023647927.1 → XP_023503695.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A5F5PEE4, A0A5F5PXM2
    Conserved Domains (2) summary
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  2. XM_014727848.2 → XP_014583334.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A5F5PEE4, A0A5F5PXM2
    Conserved Domains (2) summary
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  3. XM_023647930.1 → XP_023503698.1  GPI ethanolamine phosphate transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2LQ98, A0A5F5PIG1
    Related
    ENSECAP00000044388.3, ENSECAT00000043559.3
    Conserved Domains (2) summary
    cd16020
    Location:40 → 321
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:411 → 864
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  4. XM_014727849.2 → XP_014583335.1  GPI ethanolamine phosphate transferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A9L0SZ64
    Related
    ENSECAP00000050279.1, ENSECAT00000071470.2
    Conserved Domains (3) summary
    COG1524
    Location:6 → 280
    Npp1; Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily [General function prediction only]
    pfam04987
    Location:406 → 823
    PigN; Phosphatidylinositolglycan class N (PIG-N)
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N

  5. XM_014727845.2 → XP_014583331.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A5F5PEE4, A0A5F5PXM2
    Conserved Domains (2) summary
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  6. XM_023647931.1 → XP_023503699.1  GPI ethanolamine phosphate transferase 1 isoform X4

    UniProtKB/TrEMBL
    A0A5F5PXM2
    Conserved Domains (2) summary
    cd16020
    Location:1 → 268
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:354 → 807
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  7. XM_014727847.2 → XP_014583333.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A5F5PEE4, A0A5F5PXM2
    Related
    ENSECAP00000046766.1, ENSECAT00000071649.2
    Conserved Domains (2) summary
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  8. XM_023647928.1 → XP_023503696.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A5F5PEE4, A0A5F5PXM2
    Conserved Domains (2) summary
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)

  9. XM_023647932.1 → XP_023503700.1  GPI ethanolamine phosphate transferase 1 isoform X4

    UniProtKB/TrEMBL
    A0A5F5PXM2
    Conserved Domains (2) summary
    cd16020
    Location:1 → 268
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N
    pfam04987
    Location:354 → 807
    PigN; Phosphatidylinositolglycan class N (PIG-N)

RNA

  1. XR_002809990.1 RNA Sequence

  2. XR_002809991.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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